STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106753576Probable disease resistance protein At4g27220; Belongs to the disease resistance NB-LRR family. (1022 aa)    
Predicted Functional Partners:
LOC106767216
Uncharacterized protein LOC106767216.
  
     0.480
LOC106774015
Protein LONGIFOLIA 1 isoform X1.
  
     0.468
LOC106753539
Embryonic abundant protein USP92.
  
     0.463
LOC106767274
Miraculin.
  
     0.447
LOC106766914
Protein WVD2-like 4 isoform X1.
  
     0.442
LOC106772271
F-box/LRR-repeat protein At3g26922 isoform X1.
  
   0.441
LOC106759259
Protein LONGIFOLIA 1.
  
     0.437
LOC106769651
Myosin-binding protein 1.
  
     0.437
LOC106774890
Uncharacterized protein LOC106774890.
  
     0.437
LOC106758175
Transcription factor CYCLOIDEA-like.
  
     0.435
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.