STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106753685Calmodulin-binding protein 25-like. (239 aa)    
Predicted Functional Partners:
LOC106762409
Choline-phosphate cytidylyltransferase 1 isoform X1.
      
 0.917
LOC106765285
Choline-phosphate cytidylyltransferase 2.
      
 0.917
LOC106765679
Transcription factor MYB44.
   
  
 0.598
LOC106758558
Uncharacterized protein LOC106758558.
      
 0.575
LOC106761166
VQ motif-containing protein 9.
  
   
 0.530
LOC106771707
VQ motif-containing protein 17.
  
   
 0.523
LOC106776476
Uncharacterized protein At5g41620 isoform X1.
  
     0.499
LOC106755982
Uncharacterized protein LOC106755982.
  
     0.494
LOC106765862
Uncharacterized protein LOC106765862.
  
     0.492
LOC106756218
Microtubule-associated protein futsch.
  
     0.485
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.