STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106753796UPF0496 protein At3g19330 isoform X1. (364 aa)    
Predicted Functional Partners:
LOC106768456
Eukaryotic translation initiation factor.
   
 0.713
LOC106772868
Eukaryotic translation initiation factor 4G isoform X1.
   
 0.713
LOC106779494
Eukaryotic translation initiation factor 4G isoform X1.
   
 0.713
LOC106762357
Eukaryotic translation initiation factor isoform X1.
   
 0.713
LOC106754215
Nuclear cap-binding protein subunit 2.
   
 0.709
LOC106770717
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A.
   
 0.694
LOC106777597
Regulator of nonsense transcripts 1 homolog.
    
 0.671
LOC106761896
Polyadenylate-binding protein-interacting protein 3.
   
 
 0.635
LOC106774279
Polyadenylate-binding protein-interacting protein 3 isoform X1.
   
 
 0.635
LOC106769015
Uncharacterized protein LOC106769015 isoform X1.
  
 0.616
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.