STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106753814Zinc finger protein 511. (254 aa)    
Predicted Functional Partners:
LOC106763101
Uncharacterized protein C57A10.07.
      
 0.549
LOC106766383
Methyltransferase-like protein 5 isoform X1.
      
 0.549
LOC106772684
Protein ROOT PRIMORDIUM DEFECTIVE 1-like isoform X1.
      
 0.549
LOC106764693
Phosphoglycerate mutase-like protein 4.
      
 0.546
LOC106775115
Pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1.
      
 0.546
LOC106772888
Protein ROOT PRIMORDIUM DEFECTIVE 1.
      
 0.461
LOC106776462
Carbon catabolite repressor protein 4 homolog 4 isoform X1.
      
 0.457
LOC106773177
Glyoxylate/succinic semialdehyde reductase 1.
      
 0.438
LOC106774003
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.420
LOC106767661
erlin-2-B isoform X1.
      
 0.410
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.