STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106753988Probable terpene synthase 2 isoform X1. (561 aa)    
Predicted Functional Partners:
LOC106778111
Alpha-farnesene synthase-like.
  
  
0.907
LOC106756236
Squalene synthase.
     
 0.903
LOC106767338
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
  0.800
LOC106778445
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
     
  0.800
LOC106774972
(3S,6E)-nerolidol synthase 1-like; Belongs to the terpene synthase family.
  
 
 
0.701
LOC106766356
(3S,6E)-nerolidol synthase 1-like.
  
 
 
0.694
LOC106765590
(3S,6E)-nerolidol synthase 1.
  
 
 
0.693
LOC106766355
(3S,6E)-nerolidol synthase 1-like.
  
 
 
0.692
LOC106774503
(3S,6E)-nerolidol synthase 1.
  
 
 
0.692
LOC106775037
Farnesyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family.
   
 
 0.689
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.