STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754000Ricin B-like lectin R40G3. (302 aa)    
Predicted Functional Partners:
LOC106758109
Translocon-associated protein subunit beta; TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins; Belongs to the TRAP-beta family.
      
 0.545
LOC106776139
Uncharacterized protein LOC106776139.
      
 0.534
LOC106762586
Flowering-promoting factor 1-like protein 3.
  
     0.522
LOC106762585
Flowering-promoting factor 1.
  
     0.521
LOC106774510
Uncharacterized protein LOC106774510.
  
     0.518
LOC106764531
Flowering-promoting factor 1-like protein 2.
  
     0.514
LOC106761808
Flowering-promoting factor 1-like protein 1.
  
     0.513
LOC106771005
Subtilisin-like protease SBT3.17.
  
     0.511
LOC106767857
Flowering-promoting factor 1-like protein 3.
  
     0.508
LOC106754246
Uncharacterized protein LOC106754246.
  
     0.481
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.