STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754049Enhancer of mRNA-decapping protein 1. (348 aa)    
Predicted Functional Partners:
LOC106778809
Uncharacterized protein LOC106778809.
  
     0.505
LOC106761541
Uncharacterized serine-rich protein C215.13.
  
     0.496
LOC106772168
Nuclear pore complex protein NUP1.
  
 
  0.448
LOC106774262
Transcription factor bHLH143.
  
     0.441
LOC106768048
Uncharacterized protein LOC106768048 isoform X1.
  
     0.438
LOC106775898
Transcription factor SAC51.
  
     0.433
LOC106777518
Uncharacterized protein LOC106777518 isoform X1.
  
     0.431
LOC106771035
Protein IQ-DOMAIN 14.
  
     0.422
LOC106770954
Uncharacterized protein LOC106770954.
  
     0.422
LOC106769722
Uncharacterized protein LOC106769722 isoform X1.
  
     0.422
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.