STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754056Uncharacterized protein LOC106754056. (421 aa)    
Predicted Functional Partners:
LOC106775173
60S ribosomal protein L13a-4; Belongs to the universal ribosomal protein uL13 family.
   
   0.639
LOC106755226
60S ribosomal protein L21-2-like.
   
   0.597
LOC106757201
60S ribosomal protein L21-2.
   
   0.597
LOC106761544
60S ribosomal protein L39.
   
   0.593
LOC106754226
60S acidic ribosomal protein P1-3-like; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
   0.457
LOC106760225
60S acidic ribosomal protein P1-3-like; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
   0.457
LOC106772643
Uncharacterized protein LOC106772643.
  
     0.455
LOC106772726
Uncharacterized protein LOC106772726.
  
     0.429
LOC106772261
Uncharacterized protein LOC106772261.
  
     0.428
LOC106764142
Uncharacterized protein At1g04910.
  
     0.427
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.