STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754088DELLA protein RGL1-like; Belongs to the GRAS family. (586 aa)    
Predicted Functional Partners:
LOC106754412
E3 ubiquitin-protein ligase UPL4 isoform X1.
   
 0.745
LOC106754417
E3 ubiquitin-protein ligase UPL4 isoform X1.
   
 0.745
LOC106756049
E3 ubiquitin-protein ligase UPL3.
   
 0.735
LOC106761932
E3 ubiquitin-protein ligase UPL3.
   
 0.735
LOC106758589
Zinc finger A20 and AN1 domain-containing stress-associated protein 3.
     
 0.714
LOC111241660
Zinc finger A20 and AN1 domain-containing stress-associated protein 6-like.
     
 0.714
LOC106761977
E3 ubiquitin-protein ligase KEG.
    
 0.709
LOC106754549
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.708
LOC106779547
RING-box protein 1.
    
 0.706
LOC106752734
Probable WRKY transcription factor 51.
      
 0.689
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.