STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754114Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1131 aa)    
Predicted Functional Partners:
LOC106757404
Transcription factor PIF3.
    
 0.978
LOC106772189
Transcription factor PIF3 isoform X1.
    
 0.976
LOC106762260
Protein EARLY FLOWERING 3.
    
 0.961
LOC106765119
Protein EARLY FLOWERING 3.
    
 0.945
LOC106756809
Transcription factor PIF3.
    
 0.938
LOC106774185
ELF3-like protein 2 isoform X1.
    
 0.934
LOC106772601
Transcription factor PIF1 isoform X1.
    
 
 0.631
LOC106758015
Transcription factor PIF1 isoform X1.
    
 
 0.631
LOC106772448
DELLA protein GAI; Belongs to the GRAS family.
      
 0.623
LOC106777286
Histone deacetylase 6 isoform X1.
     
 0.591
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.