STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754335WD repeat-containing protein 25 isoform X1. (421 aa)    
Predicted Functional Partners:
LOC106759203
pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7.
   
 0.983
LOC106770835
pre-mRNA-splicing factor syf2.
    
 0.983
LOC106774547
pre-mRNA-splicing factor CWC25 homolog.
    
 0.980
LOC106757811
pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1.
   
 0.975
LOC106757975
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.967
LOC106779435
Zinc finger CCCH domain-containing protein 1.
    
 0.963
LOC106765186
Peptidyl-prolyl cis-trans isomerase CYP57.
    
 0.961
LOC106753047
pre-mRNA-splicing factor CWC22 homolog isoform X1.
   
 0.958
LOC106775650
pre-mRNA-splicing factor CWC22 homolog.
   
 0.958
LOC106760198
Uncharacterized protein LOC106760198.
    
 0.957
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.