STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754380CRIB domain-containing protein RIC10 isoform X1. (228 aa)    
Predicted Functional Partners:
LOC106760880
BURP domain protein RD22.
  
     0.497
LOC106767095
NAC domain-containing protein 35.
  
     0.452
LOC106760111
BURP domain protein RD22-like.
  
     0.441
LOC106757431
Abscisate beta-glucosyltransferase-like.
  
     0.436
LOC106774889
RPM1-interacting protein 4.
  
     0.433
LOC106757389
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.429
LOC106773813
Membrane protein of ER body 2.
  
     0.428
LOC106754593
Auxin-induced in root cultures protein 12.
  
     0.424
LOC106772505
NAC domain-containing protein 53 isoform X1.
  
     0.417
LOC106777395
VQ motif-containing protein 8, chloroplastic.
  
     0.402
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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