STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754432F-box/LRR-repeat protein 13-like. (219 aa)    
Predicted Functional Partners:
LOC106777372
Uncharacterized protein At1g66480.
  
     0.521
NLTP1_VIGRR
Non-specific lipid-transfer protein 1; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues. Has antifungal activity against F.solani, F.oxysporum, P.aphanidermatum and S.rolfsii. Has antibacterial activity against the Gram-positive bacterium S.aureus but not against the Gram-negative bacterium S.typhimurium.
  
     0.520
LOC106754440
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
     0.511
LOC106766662
UPF0481 protein At3g47200.
  
     0.501
LOC106752483
Uncharacterized protein LOC106752483.
  
     0.498
LOC106762821
Uncharacterized protein LOC106762821 isoform X1.
  
     0.498
LOC106759216
Probable non-specific lipid-transfer protein AKCS9.
  
     0.493
LOC111240799
Probable pectate lyase 1.
  
     0.485
LOC106763622
Heavy metal-associated isoprenylated plant protein 39 isoform X1.
  
     0.483
LOC106779025
Polygalacturonase 1 beta-like protein 3.
  
     0.481
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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