STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754673AP2-like ethylene-responsive transcription factor At1g79700. (399 aa)    
Predicted Functional Partners:
LOC106765803
Dof zinc finger protein DOF5.4-like.
  
   
 0.684
LOC106757719
Protein TIME FOR COFFEE isoform X1.
    
 0.659
LOC106772194
Protein TIME FOR COFFEE.
    
 0.659
LOC106758753
Dof zinc finger protein DOF2.1-like isoform X1.
    
 0.595
LOC106761714
Oleosin 1.
      
 0.584
LOC106761337
Long chain acyl-CoA synthetase 9, chloroplastic.
      
 0.547
LOC106764867
Long chain acyl-CoA synthetase 9, chloroplastic isoform X1.
      
 0.547
LOC106768318
Long chain acyl-CoA synthetase 4.
      
 0.547
LOC106778300
Probable acyl-activating enzyme 16, chloroplastic isoform X1.
      
 0.547
LOC106754589
Probable acyl-activating enzyme 16, chloroplastic.
      
 0.546
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.