STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754845Autophagy-related protein. (122 aa)    
Predicted Functional Partners:
LOC106753320
Protein NBR1 homolog isoform X1.
   
 0.997
LOC106759605
Cysteine protease.
  
 0.997
LOC106756287
Autophagy-related protein 3.
   
 0.996
LOC106776355
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
 0.996
LOC106755334
Vesicle transport v-SNARE 12.
   
  
 0.911
LOC106779707
Serine/threonine-protein kinase ATG1t isoform X1; Belongs to the protein kinase superfamily.
   
 0.901
LOC106759516
E3 ubiquitin-protein ligase PRT1 isoform X1.
   
 0.887
LOC106774258
Serine/threonine-protein kinase ATG1c isoform X1.
   
 0.859
LOC106772997
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
   
 0.858
LOC106778181
Serine/threonine-protein kinase ATG1a isoform X1.
   
 0.841
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.