STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754864PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments. Belongs to the PRA1 family. (222 aa)    
Predicted Functional Partners:
LOC106758196
PRA1 family protein; May be involved in both secretory and endocytic intracellular trafficking in the endosomal/prevacuolar compartments. Belongs to the PRA1 family.
      
 0.550
LOC106767127
Vignain; Belongs to the peptidase C1 family.
      
 0.550
LOC106778309
Beta-galactosidase.
      
 0.550
LOC106780340
Homeobox-leucine zipper protein ATHB-12.
      
 0.550
LOC106766820
Peptidylprolyl isomerase.
      
 0.511
LOC106777279
Peptidylprolyl isomerase.
      
 0.511
LOC106768429
Calcium permeable stress-gated cation channel 1.
      
 0.503
LOC106775774
Calcium permeable stress-gated cation channel 1 isoform X1.
      
 0.503
LOC106756080
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
      
 0.501
LOC106760507
Beta-galactosidase.
      
 0.422
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.