STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754922WEB family protein At2g38370. (554 aa)    
Predicted Functional Partners:
LOC111241975
Uncharacterized protein LOC111241975.
  
     0.514
LOC106774043
Uncharacterized protein LOC106774043.
  
     0.513
LOC106771548
Uncharacterized protein LOC106771548.
  
     0.508
LOC106764963
Uncharacterized protein LOC106764963.
  
     0.493
LOC106771422
Uncharacterized protein LOC106771422.
  
     0.485
LOC106771698
Uncharacterized protein LOC106771698.
  
     0.485
LOC106780273
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.482
LOC106767456
Uncharacterized protein LOC106767456.
  
     0.481
LOC106767452
Transcription factor IBH1-like 1.
  
     0.479
LOC106778173
Uncharacterized protein LOC106778173.
  
     0.479
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.