STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754936TATA-box-binding protein. (200 aa)    
Predicted Functional Partners:
LOC106758746
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.994
LOC106763916
Transcription initiation factor TFIID subunit 7.
    
 0.994
LOC106764661
Transcription initiation factor TFIID subunit 4b isoform X1.
    
 0.994
LOC106768217
Transcription initiation factor TFIID subunit 2 isoform X1.
    
 0.994
LOC106770840
Transcription initiation factor TFIID subunit 13.
   
 0.994
LOC106773625
Transcription initiation factor TFIID subunit 11.
   
 0.994
LOC106777544
Transcription initiation factor TFIID subunit 1 isoform X1.
    
 0.994
LOC106778943
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
   
 0.994
LOC106777581
Uncharacterized protein LOC106777581.
    
 0.993
LOC106765660
DNA-directed RNA polymerases II, IV and V subunit 3.
   
 0.989
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.