STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754957Uncharacterized protein LOC106754957 isoform X1. (1383 aa)    
Predicted Functional Partners:
LOC106765313
Uncharacterized protein LOC106765313.
   
  
 0.554
LOC106759893
Protein ROOT PRIMORDIUM DEFECTIVE 1.
      
 0.546
LOC106777343
Uncharacterized protein At1g76070.
  
     0.486
LOC106755337
Pentatricopeptide repeat-containing protein At5g50280, chloroplastic.
   
  
 0.465
LOC106780541
Pentatricopeptide repeat-containing protein At5g50280, chloroplastic.
   
  
 0.465
LOC106776582
Protein SIEVE ELEMENT OCCLUSION C.
  
     0.448
LOC106759792
Uncharacterized protein LOC106759792 isoform X1.
  
     0.441
LOC106756647
Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial.
      
 0.422
LOC106772031
Protein TIFY 4B isoform X1.
  
     0.422
LOC106774118
Uncharacterized protein LOC106774118 isoform X1.
  
     0.419
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.