STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106754958Phosphatidylinositol 4-kinase gamma 4; Belongs to the PI3/PI4-kinase family. (593 aa)    
Predicted Functional Partners:
LOC106753320
Protein NBR1 homolog isoform X1.
   
 0.971
LOC106759516
E3 ubiquitin-protein ligase PRT1 isoform X1.
   
 0.894
LOC106755547
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.841
LOC106764007
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.827
LOC106760925
40S ribosomal protein S10-1-like.
   
 0.811
LOC106754412
E3 ubiquitin-protein ligase UPL4 isoform X1.
   
 0.810
LOC106754417
E3 ubiquitin-protein ligase UPL4 isoform X1.
   
 0.810
LOC106775255
60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.807
LOC106771251
40S ribosomal protein S29.
   
 0.805
LOC106756704
NPL4-like protein 1.
   
 0.793
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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