STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755066Protein MIZU-KUSSEI 1. (228 aa)    
Predicted Functional Partners:
LOC106780532
Auxin-induced protein 15A-like.
  
     0.537
LOC106770821
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.533
LOC106753027
AT-hook motif nuclear-localized protein 26-like.
  
     0.531
LOC106767421
Uncharacterized protein LOC106767421.
  
     0.531
LOC106771214
Uncharacterized protein LOC106771214.
  
     0.531
LOC106767322
Abscisic acid receptor PYR1-like.
  
     0.529
LOC106774482
Uncharacterized GPI-anchored protein At1g61900.
  
     0.529
LOC106752648
Uncharacterized protein LOC106752648 isoform X1.
  
     0.528
LOC106763081
Uncharacterized protein LOC106763081.
  
     0.528
LOC106767617
NAC domain-containing protein 83 isoform X1.
  
     0.524
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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