STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755134Ankyrin repeat domain-containing protein 1. (204 aa)    
Predicted Functional Partners:
LOC106772421
Probable aspartyl aminopeptidase; Belongs to the peptidase M18 family.
    
 
 0.547
LOC106759473
cyclin-C1-2 isoform X1; Belongs to the cyclin family.
     
 0.537
LOC106778685
Ankyrin repeat-containing protein P16F5.05c isoform X1.
  
   
 0.503
LOC106768861
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase XBAT32.
  
 
  0.499
LOC106776401
Phytochrome-interacting ankyrin-repeat protein 2.
  
     0.498
LOC106779111
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...]
    
 
 0.498
LOC106757881
Ankyrin repeat-containing protein At5g02620.
  
     0.493
LOC106752758
Probable aspartyl aminopeptidase; Belongs to the peptidase M18 family.
    
 
 0.482
LOC106760145
Ankyrin repeat-containing protein At5g02620.
  
     0.478
LOC106776267
acyl-CoA-binding domain-containing protein 1.
  
     0.472
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.