STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755221BAHD acyltransferase BIA1-like. (439 aa)    
Predicted Functional Partners:
LOC106758856
Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.
      
 0.580
LOC106780272
Oleosin.
      
 0.544
LOC106770660
Transcription factor bHLH36.
  
     0.455
LOC106763760
Transcription factor bHLH84.
  
     0.450
LOC106769515
Myosin-binding protein 3-like.
  
    0.437
LOC106757166
Uncharacterized protein LOC106757166.
  
    0.435
LOC106770687
Transcription factor bHLH84.
  
     0.432
LOC106770688
Transcription factor bHLH139-like.
  
     0.426
LOC106779873
Transcription factor bHLH90.
  
     0.420
LOC106767811
Probable myosin-binding protein 6.
  
     0.416
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.