STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755198Disease resistance protein RLM3-like. (212 aa)    
Predicted Functional Partners:
LOC106774162
Disease resistance protein TAO1-like.
  
     0.506
LOC106757119
Disease resistance protein LAZ5-like.
  
     0.475
LOC106762996
Protein IQ-DOMAIN 1.
  
     0.474
LOC106774163
Disease resistance protein TAO1-like; Belongs to the disease resistance NB-LRR family.
 
     0.466
LOC106780284
Transcription factor UNE10 isoform X1.
  
     0.460
LOC111240500
TMV resistance protein N-like.
 
     0.454
LOC106758882
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.452
LOC111240495
TMV resistance protein N-like; Belongs to the disease resistance NB-LRR family.
  
     0.452
LOC106771167
Senescence-associated carboxylesterase 101 isoform X1.
  
     0.449
LOC106776227
Protein IQ-DOMAIN 1 isoform X1.
  
     0.439
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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