STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755300hevamine-A-like; Belongs to the glycosyl hydrolase 18 family. (296 aa)    
Predicted Functional Partners:
LOC106759878
Beta-hexosaminidase.
     
 0.660
LOC106760571
Beta-hexosaminidase.
     
 0.660
LOC106759380
Beta-hexosaminidase.
     
 0.660
LOC106770777
Beta-hexosaminidase.
     
 0.660
LOC106752873
Histidinol dehydrogenase, chloroplastic; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
      
 0.408
LOC106774562
Histidinol dehydrogenase, chloroplastic; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
      
 0.408
LOC106753186
Phosphoenolpyruvate carboxylase.
      
 0.407
LOC106756025
Phosphoenolpyruvate carboxylase, housekeeping isozyme.
      
 0.407
LOC106760805
Phosphoenolpyruvate carboxylase.
      
 0.407
LOC106778590
Phosphoenolpyruvate carboxylase 2.
      
 0.407
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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