STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1067553193-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial. (304 aa)    
Predicted Functional Partners:
LOC106758571
2-dehydro-3-deoxyphosphooctonate aldolase.
 
  
 0.933
LOC106769850
Probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial.
 
   
 0.791
LOC106771403
Probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial isoform X1.
 
   
 0.785
LOC106777143
Probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial.
 
   
 0.783
LOC106777157
Probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 2, mitochondrial isoform X1.
 
   
 0.780
LOC106757088
Probable arabinose 5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
  
   
 0.689
LOC106774074
Photosynthetic NDH subunit of subcomplex B 1, chloroplastic.
     
 0.584
LOC106761163
Uncharacterized protein LOC106761163.
     
 0.557
LOC106757493
Translocator protein homolog.
      
 0.554
LOC106777054
Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic.
     
 0.537
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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