STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755369Switch 2. (862 aa)    
Predicted Functional Partners:
LOC106759863
DNA excision repair protein ERCC-8.
    
 0.969
LOC106773557
DNA-directed RNA polymerase II subunit 4.
    
 0.956
LOC106765660
DNA-directed RNA polymerases II, IV and V subunit 3.
   
 0.945
LOC106759234
DNA repair protein UVH3.
   
 0.936
LOC106755651
DNA-directed RNA polymerases II, IV and V subunit 11.
    
  0.931
LOC106768321
DNA damage-binding protein 1a.
    
 0.876
LOC106756526
DNA damage-binding protein 1a isoform X1.
    
 0.876
LOC106760224
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.874
LOC106767320
DNA-directed RNA polymerases II, IV and V subunit 9A; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.874
LOC106768178
RNA polymerase II degradation factor 1.
    
 0.874
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.