STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755412Universal stress protein PHOS32. (158 aa)    
Predicted Functional Partners:
LOC106777569
Tetratricopeptide repeat protein SKI3 isoform X1.
    
 0.736
LOC106776948
Protein CDC73 homolog isoform X1.
    
 0.628
LOC106774301
Protein PAF1 homolog.
   
 0.600
LOC106762437
DExH-box ATP-dependent RNA helicase DExH15 chloroplastic.
    
 0.581
LOC106775770
DExH-box ATP-dependent RNA helicase DExH11 isoform X1.
    
 0.581
LOC106758025
Protein LEO1 homolog.
    
 0.510
LOC106760142
Protein LEO1 homolog.
    
 0.510
LOC106755056
Protein CTR9 homolog.
    
 0.488
LOC106761998
Protein CTR9 homolog.
    
 0.488
LOC106768806
Elongation factor 1-alpha isoform X1.
    
 0.475
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.