STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755424Serine/threonine-protein kinase-like protein ACR4. (916 aa)    
Predicted Functional Partners:
LOC106758030
Mediator of RNA polymerase II transcription subunit 27 isoform X1.
  
   
 0.497
LOC106768163
Calpain-type cysteine protease DEK1 isoform X1; Belongs to the peptidase C2 family.
   
 
 0.466
LOC106756606
Uncharacterized protein LOC106756606.
  
     0.459
LOC106769121
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B.
  
     0.459
LOC106759053
Uncharacterized protein LOC106759053.
  
     0.446
LOC106760561
LOW QUALITY PROTEIN: cell number regulator 8-like.
  
     0.444
LOC106761454
Uncharacterized protein LOC106761454.
  
     0.437
LOC106764494
Uncharacterized protein LOC106764494.
  
     0.437
LOC106756106
Receptor protein kinase CLAVATA1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
0.428
LOC106754399
Tetrapyrrole-binding protein, chloroplastic.
    
 
 0.417
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.