STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755462Zeaxanthin epoxidase, chloroplastic-like isoform X1. (477 aa)    
Predicted Functional Partners:
LOC106754170
Violaxanthin de-epoxidase, chloroplastic isoform X1; Belongs to the calycin superfamily. Lipocalin family.
     
 0.958
LOC106758055
Protein LUTEIN DEFICIENT 5, chloroplastic; Belongs to the cytochrome P450 family.
   
 0.933
LOC106779115
Capsanthin/capsorubin synthase, chromoplastic-like.
   
 
 0.927
LOC106763718
Beta-carotene hydroxylase 2, chloroplastic; Belongs to the sterol desaturase family.
     
 0.916
LOC106770994
Beta-carotene hydroxylase 2, chloroplastic; Belongs to the sterol desaturase family.
     
 0.916
LOC106763865
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
   
 0.553
LOC106768779
Magnesium protoporphyrin IX methyltransferase, chloroplastic.
   
 0.553
LOC106759647
Cytokinin dehydrogenase 5.
   
  
 0.513
LOC106752528
Cytokinin dehydrogenase 1.
   
  
 0.511
LOC106762749
Cytokinin dehydrogenase 7.
   
  
 0.509
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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