STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755477Probable E3 ubiquitin-protein ligase LOG2. (350 aa)    
Predicted Functional Partners:
LOC106756668
Probable E3 ubiquitin-protein ligase LOG2.
  
  
 
0.901
LOC106759287
Heavy metal-associated isoprenylated plant protein 21-like.
      
 0.579
LOC106761162
Heavy metal-associated isoprenylated plant protein 7-like isoform X1.
      
 0.579
LOC106767856
Heavy metal-associated isoprenylated plant protein 39.
      
 0.579
LOC106772496
acyl-CoA-binding domain-containing protein 4.
      
 0.546
LOC106765627
NEDD8-activating enzyme E1 catalytic subunit.
     
 0.447
LOC106778727
E3 ubiquitin ligase BIG BROTHER-related-like.
     
 0.431
LOC106761369
Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1.
      
 0.418
LOC106768437
Ribonuclease; Cytoprotective ribonuclease (RNase) required for resistance to abiotic stresses, acting as a positive regulator of mRNA decapping during stress.
      
 0.418
LOC106772154
Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1.
      
 0.418
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.