STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755507E3 ubiquitin-protein ligase RZFP34. (298 aa)    
Predicted Functional Partners:
LOC106765828
DNA polymerase eta isoform X1.
    
 0.668
LOC106756608
Serine/threonine-protein kinase-like protein CCR4.
      
 0.580
LOC106758179
alpha-L-fucosidase 1.
      
 0.580
LOC106752947
Potassium channel KAT1.
      
 0.579
LOC106756553
Protein HYPER-SENSITIVITY-RELATED 4-like; Belongs to the AAA ATPase family.
      
 0.578
LOC106758924
AAA-ATPase ASD, mitochondrial; Belongs to the AAA ATPase family.
      
 0.578
LOC106760959
AAA-ATPase At3g50940 isoform X1.
      
 0.578
LOC106776663
AAA-ATPase At2g18193; Belongs to the AAA ATPase family.
      
 0.578
LOC106777068
AAA-ATPase At3g50940 isoform X1; Belongs to the AAA ATPase family.
      
 0.578
LOC106754012
AAA-ATPase At2g46620.
      
 0.545
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.