STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755545Uncharacterized protein LOC106755545. (287 aa)    
Predicted Functional Partners:
LOC106770605
Integrator complex subunit 3.
   
 0.688
LOC106775218
Uncharacterized protein LOC106775218 isoform X1.
   
 0.675
LOC106769600
Serine/threonine-protein phosphatase 5.
   
 0.622
LOC106772716
Cleavage and polyadenylation specificity factor subunit 3-II isoform X1.
    
 0.619
LOC106765744
Integrator complex subunit 9.
    
 0.595
LOC106768856
Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial.
   
 0.559
LOC106754919
Protein SIEL-like.
   
 0.555
LOC106777659
Protein SIEL isoform X1.
   
 0.555
LOC106773557
DNA-directed RNA polymerase II subunit 4.
   
  0.540
LOC106759502
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
    
 0.514
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.