STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755650CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (152 aa)    
Predicted Functional Partners:
LOC106780360
Protein IQ-DOMAIN 1 isoform X1.
  
     0.474
LOC106753597
cyclin-J18.
  
     0.468
LOC106768632
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.461
LOC106757550
Transcription factor TCP14.
  
     0.442
LOC106775894
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.436
LOC106763485
Uncharacterized protein LOC106763485.
      
 0.434
LOC106767411
NAC domain-containing protein 73 isoform X1.
  
     0.424
LOC106769430
Transcription factor TCP14-like.
  
     0.423
LOC106777586
Probable membrane-associated kinase regulator 1 isoform X1.
  
    0.417
LOC106776929
SUPPRESSOR OF GAMMA RESPONSE 1.
  
     0.411
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.