STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755666Isoaspartyl peptidase/L-asparaginase. (321 aa)    
Predicted Functional Partners:
LOC106756016
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.948
LOC106764888
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.948
LOC106775764
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.948
LOC106754931
Aspartate aminotransferase, mitochondrial isoform X1.
   
 
 0.919
LOC106760737
Aspartate aminotransferase.
   
 
 0.915
LOC106762988
Aspartate carbamoyltransferase 1, chloroplastic; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.911
LOC106764754
Aspartate aminotransferase.
   
 
 0.910
LOC106776015
Aspartate aminotransferase.
   
 
 0.910
LOC106757967
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
    
  0.907
LOC106775914
Bifunctional nitrilase/nitrile hydratase NIT4A.
  
 
  0.903
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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