STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755680Thyroid adenoma-associated protein homolog. (2181 aa)    
Predicted Functional Partners:
LOC106774474
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
 
 0.975
LOC106756450
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 
 0.814
LOC106763323
Uncharacterized protein LOC106763323.
   
 
 0.814
LOC106757805
Uncharacterized protein LOC106757805 isoform X1.
  
 
 0.742
LOC106769298
tRNA wybutosine-synthesizing protein 2/3/4.
   
  
 0.690
LOC106766739
Nuclear pore complex protein NUP155.
  
  
 0.646
LOC106752841
tRNA (Guanine(10)-N2)-methyltransferase homolog.
   
  
 0.612
LOC106764059
Replication protein A 32 kDa subunit A isoform X1.
    
   0.585
LOC106767348
Replication protein A 32 kDa subunit A.
    
   0.585
LOC106775715
tRNA (adenine(58)-N(1))-methyltransferase.
   
  
 0.585
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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