STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755765Scarecrow-like protein 21; Belongs to the GRAS family. (565 aa)    
Predicted Functional Partners:
LOC106758100
Allene oxide cyclase, chloroplastic.
  
     0.525
LOC106774129
Allene oxide cyclase, chloroplastic isoform X1.
  
     0.515
LOC106757242
Uncharacterized protein LOC106757242.
  
     0.510
LOC106777743
Allene oxide cyclase, chloroplastic-like.
  
     0.509
LOC106759938
BTB/POZ domain-containing protein At3g05675 isoform X1.
  
     0.505
LOC111240953
Protein IQ-DOMAIN 1-like.
  
     0.496
LOC106766658
Auxin-responsive protein SAUR71.
  
     0.495
LOC106771266
Uncharacterized protein LOC106771266.
  
     0.494
LOC106775471
NAC domain-containing protein 73 isoform X1.
  
     0.493
LOC106774929
Uncharacterized protein LOC106774929.
  
     0.491
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.