STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106755905Transcription repressor OFP6-like. (187 aa)    
Predicted Functional Partners:
LOC106756864
Transcription repressor OFP16-like.
  
   
 0.565
LOC106758973
NAC domain-containing protein 83.
  
     0.534
LOC106774656
AT-hook motif nuclear-localized protein 14-like.
  
     0.532
LOC106778427
B3 domain-containing transcription factor VRN1.
  
     0.532
LOC106774890
Uncharacterized protein LOC106774890.
  
     0.531
LOC106776296
Growth-regulating factor 5.
  
    0.530
LOC106778148
Protein CUP-SHAPED COTYLEDON 3 isoform X1.
  
     0.529
LOC106779758
Uncharacterized protein LOC106779758 isoform X2.
  
     0.529
LOC106767397
Uncharacterized protein LOC106767397.
  
     0.528
LOC106756873
Transcriptional regulator SUPERMAN.
  
     0.525
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.