STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756101Homogentisate 1,2-dioxygenase. (450 aa)    
Predicted Functional Partners:
LOC106765342
4-hydroxyphenylpyruvate dioxygenase isoform X1.
 
 0.999
LOC106768138
Glutathione S-transferase zeta class-like isoform X1; Belongs to the GST superfamily.
 
 
 0.984
LOC106768140
Glutathione S-transferase zeta class; Belongs to the GST superfamily.
 
 
 0.983
LOC106779440
Glutathione S-transferase 2 isoform X1; Belongs to the GST superfamily.
 
 
 0.983
LOC106776178
Fumarylacetoacetase.
 
 
 0.898
LOC106768193
Acylpyruvase FAHD1, mitochondrial.
  
 
 0.798
LOC106772232
Uncharacterized protein LOC106772232 isoform X1.
  
 
 0.798
LOC106772283
Uncharacterized protein LOC106772283.
  
 
 0.798
LOC106772337
Uncharacterized protein LOC106772337.
  
  
 0.690
LOC106775157
Uncharacterized protein LOC106775157 isoform X1.
  
  
 0.690
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.