STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756310Heterogeneous nuclear ribonucleoprotein Q. (509 aa)    
Predicted Functional Partners:
LOC106773997
Serine/arginine-rich splicing factor SC35.
  
  
 0.639
LOC106765612
Heterogeneous nuclear ribonucleoprotein H isoform X1.
   
 0.602
LOC106752750
E3 ubiquitin-protein ligase RKP.
   
 0.523
LOC106754215
Nuclear cap-binding protein subunit 2.
    
  0.514
LOC106757655
Serine/arginine-rich-splicing factor SR34 isoform X2.
   
 0.487
LOC106762908
Eukaryotic translation initiation factor 2 subunit beta.
   
 
 0.468
LOC106755547
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.462
LOC106764007
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.462
LOC106775169
Heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1.
   
 0.460
LOC106757667
Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
   0.459
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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