STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756421tRNA dimethylallyltransferase 2 isoform X1; Belongs to the IPP transferase family. (473 aa)    
Predicted Functional Partners:
LOC106759789
tRNA dimethylallyltransferase 9 isoform X1; Belongs to the IPP transferase family.
  
  
0.924
LOC106759584
Isopentenyl-diphosphate Delta-isomerase I.
    
 0.846
LOC106756883
Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic-like; Belongs to the FPP/GGPP synthase family.
  
 
 0.833
LOC106757160
Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic; Belongs to the FPP/GGPP synthase family.
  
 
 0.833
LOC106764268
Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic.
  
 
 0.833
LOC106765389
Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic; Belongs to the FPP/GGPP synthase family.
  
 
 0.833
LOC106769268
Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial; Belongs to the FPP/GGPP synthase family.
  
 
 0.833
LOC106769524
Geranylgeranyl pyrophosphate synthase, chloroplastic; Belongs to the FPP/GGPP synthase family.
  
 
 0.833
LOC106777830
Geranylgeranyl pyrophosphate synthase 7, chloroplastic; Belongs to the FPP/GGPP synthase family.
  
 
 0.833
LOC106756887
Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic-like; Belongs to the FPP/GGPP synthase family.
  
 
 0.833
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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