STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756445ALBINO3-like protein 1, chloroplastic isoform X1. (536 aa)    
Predicted Functional Partners:
LOC106756512
Protein transport protein Sec61 subunit alpha-like; Belongs to the SecY/SEC61-alpha family.
   
 0.800
LOC106778146
Protein transport protein Sec61 subunit alpha; Belongs to the SecY/SEC61-alpha family.
   
 0.800
LOC106760164
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
   
 
 0.787
LOC106772589
Uncharacterized protein LOC106772589.
   
 
 0.780
LOC106761906
Preprotein translocase subunit SECY, chloroplastic isoform X1.
   
 
 0.766
LOC106777059
Signal recognition particle 43 kDa protein, chloroplastic.
    
 
 0.737
LOC106772202
DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1.
      
 0.672
LOC106777690
DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1.
      
 0.672
LOC106769884
Uncharacterized protein LOC106769884.
   
 
 0.639
LOC106756018
Uncharacterized protein LOC106756018.
   
 
 0.614
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.