STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756480Ras-related protein RABA4d. (228 aa)    
Predicted Functional Partners:
LOC106768501
Kinesin-like protein KIN-14E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.739
LOC106777740
Kinesin-like protein KIN-14I; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.739
LOC106761977
E3 ubiquitin-protein ligase KEG.
   
 0.639
LOC106770517
Phosphatidylinositol 4-kinase beta 1 isoform X1; Belongs to the PI3/PI4-kinase family.
    
 0.558
LOC106780708
Phosphatidylinositol 4-kinase beta 1; Belongs to the PI3/PI4-kinase family.
    
 0.558
LOC106771949
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.547
LOC106771767
Exocyst complex component SEC8.
    
 0.540
LOC106768148
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.515
LOC106768701
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.515
LOC106760371
Rho GTPase-activating protein REN1.
    
 0.471
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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