STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756516Protein argonaute MEL1; Belongs to the argonaute family. (979 aa)    
Predicted Functional Partners:
LOC106779261
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.762
LOC106760113
Endoribonuclease Dicer homolog 1; Belongs to the helicase family. Dicer subfamily.
   
 0.735
LOC106762208
Endoribonuclease Dicer homolog 3a isoform X1; Belongs to the helicase family. Dicer subfamily.
   
 0.735
LOC106760995
Ribonuclease 3-like protein 1 isoform X1.
   
 0.649
LOC106768645
Dicer-like protein 4; Belongs to the helicase family. Dicer subfamily.
   
 0.649
LOC106754054
Endoribonuclease Dicer homolog 2 isoform X1.
   
 0.638
LOC106775331
Endoribonuclease Dicer homolog 2; Belongs to the helicase family. Dicer subfamily.
   
 0.638
LOC106758317
Endoribonuclease Dicer homolog 2 isoform X1; Belongs to the helicase family. Dicer subfamily.
   
 0.638
LOC106774406
Endoribonuclease Dicer homolog 2 isoform X1; Belongs to the helicase family. Dicer subfamily.
   
 0.638
LOC106756484
RBR-type E3 ubiquitin transferase.
      
 0.579
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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