STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756509Protein ORANGE, chloroplastic. (311 aa)    
Predicted Functional Partners:
LOC106772767
Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic isoform X1.
  
   
 0.547
LOC106758023
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
     0.517
CipCp29
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
     0.505
LOC106752604
Ethylene-responsive transcription factor RAP2-3-like.
  
     0.504
LOC106773542
Photosystem I reaction center subunit VI-2, chloroplastic.
  
     0.500
LOC106762156
Photosystem I reaction center subunit VI-2, chloroplastic-like.
  
     0.498
LOC106758891
Light-harvesting complex-like protein OHP1, chloroplastic.
  
     0.497
LOC106764695
Oxygen-evolving enhancer protein 2, chloroplastic-like.
  
     0.490
LOC106779637
Uncharacterized protein LOC106779637.
  
     0.490
LOC106775556
Cyclic dof factor 4 isoform X1.
  
     0.490
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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