STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756578Uncharacterized protein LOC106756578. (439 aa)    
Predicted Functional Partners:
LOC106757681
Nuclear pore complex protein NUP205 isoform X1.
   
 0.983
LOC106774194
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.983
LOC106758026
Nuclear pore complex protein NUP88.
    
 0.982
LOC106762440
Nuclear pore protein.
    
 0.981
LOC106766739
Nuclear pore complex protein NUP155.
    
 0.980
LOC106777086
Protein SEH1; Belongs to the WD repeat SEC13 family.
    
 0.980
LOC106755567
Nuclear pore complex protein NUP54.
    
 0.977
LOC106756624
Protein GLE1 isoform X1.
    
 0.971
LOC106771945
Nuclear pore complex protein NUP160 isoform X1.
   
 0.962
LOC106765180
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.955
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.