STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756566Putative pentatricopeptide repeat-containing protein At1g02420. (500 aa)    
Predicted Functional Partners:
LOC106761541
Uncharacterized serine-rich protein C215.13.
  
     0.505
LOC106778809
Uncharacterized protein LOC106778809.
  
     0.501
LOC106775389
WEB family protein At3g51220.
  
     0.453
LOC106769283
Uncharacterized protein LOC106769283.
  
     0.421
LOC106773128
Uncharacterized protein LOC106773128 isoform X1.
  
    0.418
LOC106757539
Cytochrome c oxidase subunit 5C-2-like.
  
     0.409
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.