STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756604Protein yippee-like; Belongs to the yippee family. (130 aa)    
Predicted Functional Partners:
LOC106765556
Basic 7S globulin 2-like; Belongs to the peptidase A1 family.
     
 0.705
LOC106767968
LOW QUALITY PROTEIN: basic 7S globulin.
     
 0.705
LOC106761448
Carotenoid cleavage dioxygenase 8 homolog B, chloroplastic.
      
 0.696
LOC106769475
Protein NRT1/ PTR FAMILY 2.11.
      
 0.586
LOC106775492
Basic 7S globulin 2-like; Belongs to the peptidase A1 family.
     
 0.578
LOC106756363
Ran-binding protein 10 isoform X1.
   
 
 0.486
LOC106754805
Protein RMD5 homolog A.
    
 
 0.418
LOC106775767
Protein RMD5 homolog A.
    
 
 0.418
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.