STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756679Protein MARD1. (274 aa)    
Predicted Functional Partners:
LOC106767549
Transcription factor TCP5.
  
 
   0.566
LOC106769854
Transcription factor TCP13.
  
 
   0.520
LOC106758195
Transcription factor TCP17.
  
 
   0.505
LOC106762105
Uncharacterized protein LOC106762105.
  
     0.494
LOC106758054
AT-rich interactive domain-containing protein 1 isoform X1.
  
     0.484
LOC106778614
Transcription factor TCP4.
  
     0.480
LOC106769651
Myosin-binding protein 1.
  
     0.479
LOC106771455
Low-temperature-induced 65 kDa protein isoform X1.
  
     0.479
LOC106755763
Transcription factor TCP5.
  
 
   0.477
LOC106767828
Transcription factor DICHOTOMA.
  
     0.474
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.