STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756697Probable CCR4-associated factor 1 homolog 9. (274 aa)    
Predicted Functional Partners:
LOC106774010
CCR4-NOT transcription complex subunit 1 isoform X1.
   
 0.899
LOC106756312
Probable NOT transcription complex subunit VIP2 isoform X1.
   
 0.859
LOC106759196
Probable NOT transcription complex subunit VIP2 isoform X1.
   
 0.859
LOC106753911
General negative regulator of transcription subunit 3-like isoform X1.
    
 0.850
LOC106779415
General negative regulator of transcription subunit 3 isoform X1.
    
 0.850
LOC106768606
CCR4-NOT transcription complex subunit 10 isoform X1.
    
 0.800
LOC106771940
CCR4-NOT transcription complex subunit 11.
    
 0.798
LOC106759176
Uncharacterized protein LOC106759176 isoform X1.
    
 0.796
LOC106764514
CCR4-NOT transcription complex subunit 9 isoform X1.
   
 0.796
LOC106764742
Uncharacterized protein LOC106764742.
    
 0.796
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.